@CampbellTayte @bielleogy @lpachter This is why we cant have nice things. Sigh. BWA is 2009 (https://t.co/BJr52v4abU), Bowtie is 2009 (https://t.co/fp3VvadRP5) But Bowtie2 exists, as does BWA-MEM and BWA-MEM2. It’s twitter, I used short hand and I linked
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Langmead et al. A simple and effective strategy. Just a pleasure to go through. https://t.co/Sns5sjNnQm
@DIP_UAdeC @SalvadorHV @DrCrissh Ultrafast and memory-efficient alignment of short DNA sequences to the human genome https://t.co/WeC09gdskH
@StevenSalzberg1 @BenLangmead Sorry but I was trying to be very exact. The Bowtie1 paper stated specifically that "Bowtie does not yet support paired-end alignment or alignments with insertions or deletions." https://t.co/rBI2N5udGB
@lpachter @StevenSalzberg1 @BenLangmead @naturemethods @GenomeBiology That’s not the paper. This is the paper https://t.co/ByUt27sOgX
🎉 New formula bowtie in Brewsci/bio for Linux and macOS! ℹ️ Ultrafast memory-efficient short read aligner 🍺 brew install brewsci/bio/bowtie 🏡 https://t.co/PebuvvWbqf 📖 https://t.co/0g0cRiOSx6 🔬 https://t.co/aaJgJTeT2y 🐧 https://t.co/lyKHNJu5CN @linuxbrew #
Suffix trees example : MUMmer https://t.co/06PPM6LV1k Suffix arrays (as BWT) example : bowtie https://t.co/sQlSq5ssJk
OF NOTE: Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. http://t.co/LTgvRV9acn
Ultrafast and memory-efficient #alignment of short #DNA #sequences to the human #genome. http://t.co/9GnHmQiXAY