RT @jbloom_lab: This is important for any study basing its conclusions on minor non-fixed variants. We showed first study of transmission b…
RT @jbloom_lab: This is important for any study basing its conclusions on minor non-fixed variants. We showed first study of transmission b…
This is important for any study basing its conclusions on minor non-fixed variants. We showed first study of transmission bottlenecks for flu got things wrong by calling spurious mutations and wildly over-estimating bottleneck size: https://t.co/ZY1LGuL6Dt
@fragmites This was how I learned it
RT @JSheltzer: @acritschristoph @biorxivpreprint mishandling paired-end reads is surprisingly common! CC @jbloom_lab who documented this in…
RT @JSheltzer: @acritschristoph @biorxivpreprint mishandling paired-end reads is surprisingly common! CC @jbloom_lab who documented this in…
@acritschristoph @biorxivpreprint mishandling paired-end reads is surprisingly common! CC @jbloom_lab who documented this in a previous study of viral diversity. https://t.co/4AXfJ3lA28
Reconciling disparate estimates of viral genetic diversity during human influenza infections - https://t.co/nhbop62AMx
Reconciling #disparate estimates of viral genetic #diversity during human #influenza infections..https://t.co/hnAh8AhNLV
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @dbweissman: Time to correct our paper! https://t.co/AGoKQqiBy4
RT @uwmnewsroom: How genetically diverse are #Influenza viruses present in people with acute infections & transmitted to others? #Flu virus…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @arroboso: Very nice thread. Check the 4 tweets https://t.co/zEMJedyhrf
Very nice thread. Check the 4 tweets
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
Time to correct our paper!
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
Conclusions? Glam journal study wrong. Open access right
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @uwmnewsroom: How genetically diverse are #Influenza viruses present in people with acute infections & transmitted to others? #Flu virus…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @uwmnewsroom: How genetically diverse are #Influenza viruses present in people with acute infections & transmitted to others? #Flu virus…
How genetically diverse are #Influenza viruses present in people with acute infections & transmitted to others? #Flu virus evolution researchers @jbloom_lab @ksxue @fredhutch @uwgenome reconcile disparate estimates to resolve this mystery @NatureGenet
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @erictdawson: An interesting story and important lesson in just four tweets. If I can't see the code, I'm going to have trust issues. #O…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
An interesting story and important lesson in just four tweets. If I can't see the code, I'm going to have trust issues. #OpenScience is #GoodScience.
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
On the importance of code and data availability
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
Read2s shuffled amongst patients, giving rise to inaccurate estimates of viral diversity in Hong Kong flu data. How could the bug (pun unintended) have been detected in the first place? Independent validation by a different method may be?
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @pathogenomenick: Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide colu…
Imagine how much bioinformatics pain would have been saved over last ~10 years if PE reads were encoded in a wide column format rather than in separate or interleaved FASTA format! https://t.co/szg0WFUXFs #fileformatsmatter
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @ksxue: Our comparison of influenza deep-sequencing studies is out in @NatureGenet. Results support low diversity and a narrow transmiss…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…
RT @jbloom_lab: Mystery of how much viral diversity present in acute human flu is resolved in our new study by @ksxue: https://t.co/ZY1LGuL…