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Changing coding culture | Nature Biotechnology #force2019 https://t.co/I6KG5INVWQ
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This is a good thing. I remember 20+ years ago catching an error in code in a colleague's program while porting it from FORTRAN to C that invalidated the prior work.
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RT @Brooke_LaFlamme: @DanielBolnick I know that @NatureBiotech requires code review if the code is central to the paper. They're currently…
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@DanielBolnick I know that @NatureBiotech requires code review if the code is central to the paper. They're currently doing a trial with @CodeOceanHQ (along with @naturemethods and @NatMachIntell) https://t.co/5QU2i0hr7y
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RT @bonohu: “Nature Biotechnology’s peer review trial with Code Ocean highlights the importance of ‘containers’ in enhancing software usabi…
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“Nature Biotechnology’s peer review trial with Code Ocean highlights the importance of ‘containers’ in enhancing software usability, reproducibility and code-writing in academia.” / “Changing coding culture | Nature Biotechnology” https://t.co/3dpszwfoKq
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Hugely important message for ML developers and glad to have been a guinea pig for @NatMachIntell!
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Reproducibility and accessibility for academic papers with code: the advantages of a container platform https://t.co/ozIGmU4VLd editorial in @NatureBiotech See also announcement (last year) Nature journals peer review trial with @CodeOceanHQ https://t.co/4
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RT @_ms03: This is a nice initiative, but in my opinion properly documenting what was done (=publishing the code) is much more important th…
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RT @_ms03: This is a nice initiative, but in my opinion properly documenting what was done (=publishing the code) is much more important th…
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This is a nice initiative, but in my opinion properly documenting what was done (=publishing the code) is much more important than some fancy runnable environment. How come we don't even require the former yet?
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RT @dhimmel: Nice to see @NatureBiotech and @CodeOceanHQ working to improve software reproducibility through containers like #Docker. I hop…
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RT @dhimmel: Nice to see @NatureBiotech and @CodeOceanHQ working to improve software reproducibility through containers like #Docker. I hop…
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Nice to see @NatureBiotech and @CodeOceanHQ working to improve software reproducibility through containers like #Docker. I hope however that academia will soon wake up to the fact that the lack of open licenses on software will stymie these efforts. https:
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RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
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RT @ReaderMeter: "Containers improve the quality, documentation and accessibility of software for both reviewers and users. This bodes well…
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Unlike commercial software—where developers implement formal code review, unit testing and quality assurance of packages—the default for many academic labs is to generate something more akin to ‘Soprano code’: write it, use it, then ‘fuhgeddaboudit’. from
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"Containers improve the quality, documentation and accessibility of software for both reviewers and users. This bodes well not only for reproducibility [...], but also more generally for the quality of code writing in academic research." ht @betenoire1 htt
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RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
300,924 followers
RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
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RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
1,137 followers
RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
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RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
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At first I read that Nat Biotech is formally trialling software described in the paper and my heart stopped. Tho frankly, that would explain a lot #OverlyHonestEditor A propos dependencies, see recent tweet from @lh3lh3. Dependencies are the doom of softwa
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RT @Magda_Skipper: .@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ c…
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.@NatureBiotech take stock of their trial to formally peer review software accompanying papers using @CodeOceanHQ compute capsules that bundle code, run scripts, datasets and a computing environment https://t.co/bTvK3vA4Uo
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
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RT @NatureBiotech: Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’…
300,924 followers
Changing coding culture. @NatureBiotech’s #peerreview trial with @CodeOceanHQ highlights the importance of ‘containers’ in enhancing software usability, reproducibility and code-writing in academia https://t.co/KHifriR5H1